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diff --git a/buildscripts/PhpDocumentor/phpDocumentor/Io.inc b/buildscripts/PhpDocumentor/phpDocumentor/Io.inc
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--- a/buildscripts/PhpDocumentor/phpDocumentor/Io.inc
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@@ -1,992 +0,0 @@
-<?php
-/**
- * File and input handling routines
- *
- * This class parses command-line options, and works with files to
- * generate lists of files to parse based on the ignore/include options
- *
- * phpDocumentor :: automatic documentation generator
- *
- * PHP versions 4 and 5
- *
- * Copyright (c) 2000-2006 Joshua Eichorn, Gregory Beaver
- *
- * LICENSE:
- *
- * This library is free software; you can redistribute it
- * and/or modify it under the terms of the GNU Lesser General
- * Public License as published by the Free Software Foundation;
- * either version 2.1 of the License, or (at your option) any
- * later version.
- *
- * This library is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
- * Lesser General Public License for more details.
- *
- * You should have received a copy of the GNU Lesser General Public
- * License along with this library; if not, write to the Free Software
- * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
- *
- * @package phpDocumentor
- * @author Joshua Eichorn <jeichorn@phpdoc.org>
- * @author Gregory Beaver <cellog@php.net>
- * @copyright 2000-2006 Joshua Eichorn, Gregory Beaver
- * @license http://www.opensource.org/licenses/lgpl-license.php LGPL
- * @version CVS: $Id: Io.inc 286921 2009-08-08 05:01:24Z ashnazg $
- * @filesource
- * @link http://www.phpdoc.org
- * @link http://pear.php.net/PhpDocumentor
- * @since 0.1
- */
-/**
- * Class to handle file and user io opperations
- *
- * @author Joshua Eichorn <jeichorn@phpdoc.org>
- * @author Gregory Beaver <cellog@php.net>
- * @version $Id: Io.inc 286921 2009-08-08 05:01:24Z ashnazg $
- * @package phpDocumentor
- */
-class Io
-{
-
- /**
- * Holds all the options that are avaible to the cmd line interface
- * and to the different web interfaces
- */
- var $phpDocOptions;
- /**
- * Format: array(array(regexp-ready string to search for whole path,
- * regexp-ready string to search for basename of ignore strings),...)
- * @var false|array
- */
- var $ignore;
- /**
- * A specific array of values that boolean-based arguments can understand,
- * aided by the {@link decideOnOrOff()} helper method.
- *
- * Use lowercase letters always, to simplify string comparisons
- * @var array
- */
- var $valid_booleans = array
- (
- '', ' ', 'on', 'y', 'yes', 'true', '1',
- 'off', 'n', 'no', 'false', '0'
-
- );
-
- /**
- * creates an array $this->phpDocOptions and sets program options in it.
- * Array is in the format of:
- * <pre>
- * [filename][tag][] = "f";
- * [filename][tag][] = "-file";
- * [filename][desc] "name of file to parse"
- * </pre>
- */
- function Io()
- {
- $this->phpDocOptions['filename']['tag'] = array( "-f", "--filename");
- $this->phpDocOptions['filename']['desc'] = "name of file(s) to parse ',' file1,file2. Can contain complete path and * ? wildcards";
- $this->phpDocOptions['filename']['type'] = "path";
-
- $this->phpDocOptions['directory']['tag'] = array( "-d", "--directory");
- $this->phpDocOptions['directory']['desc'] = "name of a directory(s) to parse directory1,directory2";
- $this->phpDocOptions['directory']['type'] = "path";
-
- $this->phpDocOptions['examplesdir']['tag'] = array( "-ed", "--examplesdir");
- $this->phpDocOptions['examplesdir']['desc'] = "full path of the directory to look for example files from @example tags";
- $this->phpDocOptions['examplesdir']['type'] = "path";
-
- $this->phpDocOptions['templatebase']['tag'] = array( "-tb", "--templatebase");
- $this->phpDocOptions['templatebase']['desc'] = "base location of all templates for this parse.";
- $this->phpDocOptions['templatebase']['type'] = "path";
-
- $this->phpDocOptions['target']['tag'] = array("-t", "--target");
- $this->phpDocOptions['target']['desc'] = "path where to save the generated files";
- $this->phpDocOptions['target']['type'] = "path";
-
- $this->phpDocOptions['ignore']['tag'] = array("-i", "--ignore");
- $this->phpDocOptions['ignore']['desc'] = "file(s) that will be ignored, multiple separated by ','. Wildcards * and ? are ok";
- $this->phpDocOptions['ignore']['type'] = "path";
-
- $this->phpDocOptions['ignoresymlinks']['tag'] = array("-is", "--ignoresymlinks");
- $this->phpDocOptions['ignoresymlinks']['desc'] = "ignore symlinks to other files or directories, default is off";
- $this->phpDocOptions['ignoresymlinks']['type'] = "set";
- $this->phpDocOptions['ignoresymlinks']['validvalues'] = $this->valid_booleans;
-
- $this->phpDocOptions['ignoretags']['tag'] = array("-it", "--ignore-tags");
- $this->phpDocOptions['ignoretags']['desc'] = "tags to ignore for this parse. @package, @subpackage, @access and @ignore may not be ignored.";
- $this->phpDocOptions['ignoretags']['type'] = "value";
-
- $this->phpDocOptions['hidden']['tag'] = array("-dh", "--hidden");
- $this->phpDocOptions['hidden']['desc'] = "set equal to on (-dh on) to descend into hidden directories (directories starting with '.'), default is off";
- $this->phpDocOptions['hidden']['type'] = "set";
- $this->phpDocOptions['hidden']['validvalues'] = $this->valid_booleans;
-
- $this->phpDocOptions['quiet']['tag'] = array("-q", "--quiet");
- $this->phpDocOptions['quiet']['desc'] = "do not display parsing/conversion messages. Useful for cron jobs on/off default off";
- $this->phpDocOptions['quiet']['type'] = "set";
- $this->phpDocOptions['quiet']['validvalues'] = $this->valid_booleans;
-
- $this->phpDocOptions['undocumentedelements']['tag'] = array("-ue", "--undocumentedelements");
- $this->phpDocOptions['undocumentedelements']['desc'] = "Control whether or not warnings will be shown for undocumented elements. Useful for identifying classes and methods that haven't yet been documented on/off default off";
- $this->phpDocOptions['undocumentedelements']['type'] = "set";
- $this->phpDocOptions['undocumentedelements']['validvalues'] = $this->valid_booleans;
-
- $this->phpDocOptions['title']['tag'] = array("-ti","--title");
- $this->phpDocOptions['title']['desc'] = "title of generated documentation, default is 'Generated Documentation'";
- $this->phpDocOptions['title']['type'] = "value";
-
- $this->phpDocOptions['help']['tag'] = array("-h", "--help");
- $this->phpDocOptions['help']['desc'] = " show this help message";
-
- $this->phpDocOptions['useconfig']['tag'] = array("-c","--useconfig");
- $this->phpDocOptions['useconfig']['desc'] = "Use a Config file in the users/ subdirectory for all command-line options";
- $this->phpDocOptions['useconfig']['type'] = "value";
-
- $this->phpDocOptions['parseprivate']['tag'] = array("-pp","--parseprivate");
- $this->phpDocOptions['parseprivate']['desc'] = "parse @internal and elements marked private with @access. Use on/off, default off";
- $this->phpDocOptions['parseprivate']['type'] = "set";
- $this->phpDocOptions['parseprivate']['validvalues'] = array('on', 'off');
-
- $this->phpDocOptions['packageoutput']['tag'] = array("-po","--packageoutput");
- $this->phpDocOptions['packageoutput']['desc'] = "output documentation only for selected packages. Use a comma-delimited list";
- $this->phpDocOptions['packageoutput']['type'] = "value";
-
- $this->phpDocOptions['defaultpackagename']['tag'] = array("-dn","--defaultpackagename");
- $this->phpDocOptions['defaultpackagename']['desc'] = "name to use for the default package. If not specified, uses 'default'";
- $this->phpDocOptions['defaultpackagename']['type'] = "value";
-
- $this->phpDocOptions['defaultcategoryname']['tag'] = array("-dc","--defaultcategoryname");
- $this->phpDocOptions['defaultcategoryname']['desc'] = "name to use for the default category. If not specified, uses 'default'";
- $this->phpDocOptions['defaultcategoryname']['type'] = "value";
-
- $this->phpDocOptions['output']['tag'] = array("-o","--output");
- $this->phpDocOptions['output']['desc'] = "output information to use separated by ','. Format: output:converter:templatedir like \"HTML:frames:phpedit\"";
- $this->phpDocOptions['output']['type'] = "value";
-
- $this->phpDocOptions['converterparams']['tag'] = array("-cp","--converterparams");
- $this->phpDocOptions['converterparams']['desc'] = "dynamic parameters for a converter, separate values with commas";
- $this->phpDocOptions['converterparams']['type'] = "value";
-
- $this->phpDocOptions['customtags']['tag'] = array("-ct","--customtags");
- $this->phpDocOptions['customtags']['desc'] = "custom tags, will be recognized and put in tags[] instead of unknowntags[]";
- $this->phpDocOptions['customtags']['type'] = "value";
-
- $this->phpDocOptions['sourcecode']['tag'] = array("-s","--sourcecode");
- $this->phpDocOptions['sourcecode']['desc'] = "generate highlighted sourcecode for every parsed file (PHP 4.3.0+ only) on/off default off";
- $this->phpDocOptions['sourcecode']['type'] = "set";
- $this->phpDocOptions['sourcecode']['validvalues'] = array('on', 'off');
-
- $this->phpDocOptions['javadocdesc']['tag'] = array("-j","--javadocdesc");
- $this->phpDocOptions['javadocdesc']['desc'] = "JavaDoc-compliant description parsing. Use on/off, default off (more flexibility)";
- $this->phpDocOptions['javadocdesc']['type'] = "set";
- $this->phpDocOptions['javadocdesc']['validvalues'] = array('on', 'off');
-
- $this->phpDocOptions['pear']['tag'] = array("-p","--pear");
- $this->phpDocOptions['pear']['desc'] = "Parse a PEAR-style repository (package is directory, _members are @access private) on/off default off";
- $this->phpDocOptions['pear']['type'] = "set";
- $this->phpDocOptions['pear']['validvalues'] = array('on', 'off');
-
- $this->phpDocOptions['readmeinstallchangelog']['tag'] = array("-ric","--readmeinstallchangelog");
- $this->phpDocOptions['readmeinstallchangelog']['desc'] = "Specify custom filenames to parse like README, INSTALL or CHANGELOG files";
- $this->phpDocOptions['readmeinstallchangelog']['type'] = "value";
-
- $this->phpDocOptions['general']['message'] ="You can have multiple directories and multiple files, as well as a combination of both options";
- }
-
-
- /**
- * create the help message for display on the command-line
- * @return string a string containing a help message
- */
- function displayHelpMsg()
- {
- unset($ret);
- $ret = "\n";
- foreach($this->phpDocOptions as $data)
- {
- unset($tag);
- $tag = "";
- if (isset($data['tag']))
- {
- if (is_array($data['tag'])) {
- foreach($data['tag'] as $param) {
- $tag .= "$param ";
- }
- }
- $taglen = 34;
- $outputwidth = 79;
- $tagspace = str_repeat(" ",$taglen);
- $tmp = " ".trim($tag).$tagspace;
- $tmp = substr($tmp,0,$taglen);
- $d = wordwrap(ltrim($data['desc']),($outputwidth-$taglen));
- $dt = explode("\n",$d);
- $dt[0] = $tmp .$dt[0];
- for($i=1;$i<count($dt);$i++)
- {
- $dt[$i] = $tagspace.$dt[$i];
- }
- $ret .= implode("\n",$dt)."\n\n";
-
- }
- }
- $ret .= "\n".wordwrap($data['message'],$outputwidth)."\n";
- return $ret;
- }
-
- /**
- * calls {@link file_exists()} for each value in include_path,
- * then calls {@link is_readable()} when it finds the file
- * @param string
- * @return boolean
- */
- function isIncludeable($filename)
- {
- $test = realpath($filename);
- if ($test && is_readable($test)) {
- return true; // for absolute paths
- }
- $ip = get_include_path();
- if (PHPDOCUMENTOR_WINDOWS)
- {
- $ip = explode(';', $ip);
- } else {
- $ip = explode(':', $ip);
- }
- foreach($ip as $path)
- {
- if ($a = realpath($path . DIRECTORY_SEPARATOR . $filename))
- {
- if (is_readable($a))
- {
- return true;
- }
- }
- }
- return false;
- }
-
- /**
- * Parses $_SERVER['argv'] and creates a setup array
- * @return array a setup array
- * @global array command-line arguments
- * @todo replace with Console_* ?
- */
- function parseArgv()
- {
- global $argv;
-
- // defaults for setting
- $setting['hidden'] = "off";
- $setting['ignoresymlinks'] = 'off';
- $setting['template'] = 'templates' . PATH_DELIMITER .'default' . PATH_DELIMITER;
-
- $valnext = "junk";
- $data = array();
- if(isset($argv) && is_array($argv))
- {
- foreach ($argv as $cmd)
- {
- if ($cmd == '--') {
- continue;
- }
- if ($cmd == '-h' || $cmd == '--help')
- {
- echo $this->displayHelpMsg();
- die();
- }
-
- // at first, set the arg value as if we
- // already know it's formatted normally, e.g.
- // -q on
- $setting[$valnext] = $cmd;
-
- if (isset($data['type']) && $data['type'] == 'set') {
-
- if ($valnext !== 'junk' && strpos(trim($cmd),'-') === 0) {
- // if valnext isn't 'junk' (i.e it was an arg option)
- // then the first arg needs an implicit "" as its value, e.g.
- // ... -q -pp ... ===> ... -q '' -pp ...
- $setting[$valnext] = '';
-
- } else if (!in_array(strtolower($cmd), $data['validvalues'], true)) {
- // the arg value is not a valid value
- addErrorDie(PDERROR_INVALID_VALUES, $valnext, $cmd,
- '(' . implode(', ', $data['validvalues']) . ')');
- }
- }
-
- foreach( $this->phpDocOptions as $name => $data )
- {
- if (!empty($data['tag']))
- {
- if (in_array($cmd,$data['tag']))
- {
- $valnext = $name;
- break;
- }
- else
- {
- $valnext = "junk";
- }
- }
- }
-
- if ($valnext == 'junk' && (strpos(trim($cmd),'-') === 0)) {
- // this indicates the last arg of the command
- // is an arg option (-) that was preceded by unrecognized "junk"
- addErrorDie(PDERROR_UNKNOWN_COMMANDLINE,$cmd);
-
- } else if ($valnext != 'junk' && (strpos(trim($cmd),'-') === 0)) {
- // this indicates the last arg of the command
- // is an arg option (-) without an arg value
-
- // add an empty arg "value" for this arg "option"
- $setting[$valnext] = '';
- }
-
-
- }
- } else
- {
- echo "Please use php-cli.exe in windows, or set register_argc_argv On";
- die;
- }
- /* $setting will always have at least 3 elements
- [hidden] => off
- [ignoresymlinks] => 'off'
- [template] => templates/default
- */
- if (count($setting) < 4) {
- echo $this->displayhelpMsg();
- die();
- }
-
- return $setting;
- }
-
-
- /**
- * @return array list of files in a directory
- * @param string $directory full path to the directory you want the list of
- * @param bool whether to list files that begin with . like .bash_history
- * @param bool whether to ignore symlinks
- */
- function dirList($orig_directory, $hidden = false, $ignore_symlinks = false)
- {
- $directory = realpath($orig_directory);
- $ret = false;
- if (! @is_dir($directory))
- {
- die("directory: '$directory' not found\n");
- }
- $ret = array();
- $d = @dir($directory); // thanks to Jason E Sweat (jsweat@users.sourceforge.net) for fix
- while($d && ($entry=$d->read()) !== false) {
- if (strcmp($entry,".") == 0 || strcmp($entry,"..") == 0) {
- continue;
- }
-
- // skip hidden files, if we're supposed to
- if (!$hidden)
- {
- if (substr($entry,0,1) == ".")
- {
- phpDocumentor_out("Hidden " . $directory . PATH_DELIMITER . $entry . " Ignored\n");
- continue;
- }
- }
-
- // skip symlink files, if we're supposed to
- if ($ignore_symlinks)
- {
- if (is_link($directory . PATH_DELIMITER . $entry))
- {
- phpDocumentor_out("Symlink " . $directory . PATH_DELIMITER . $entry . " Ignored\n");
- continue;
- }
- }
-
- if (is_file($directory . PATH_DELIMITER . $entry)) {
- $ret[] = $directory . PATH_DELIMITER . $entry;
- }
- if (is_dir($directory . PATH_DELIMITER . $entry)) {
- $tmp = $this->dirList($directory . PATH_DELIMITER . $entry, $hidden, $ignore_symlinks);
- if (is_array($tmp)) {
- foreach($tmp as $ent) {
- $ret[] = $ent;
- }
- }
- }
- }
- if ($d) $d->close();
- return $ret;
- }
-
- /**
- * Retrieve common directory (case-insensitive in windows)
- *
- * takes the list of files, and returns the subdirectory they share in common,
- * so in this list:
- *
- * <code>
- * array(
- * "/dir1/dir2/subdir/dir3/filename.ext",
- * "/dir1/dir2/subdir/dir4/filename.ext",
- * "/dir1/dir2/mydir/dir5/filename.ext");
- * </code>
- *
- * getBase will return "/dir1/dir2"
- * @param array array of strings
- */
- function getBase($filelist)
- {
- $masterPath = false;
- foreach($filelist as $path)
- {
- if (!$masterPath)
- {
- $masterPath = str_replace('\\','/',dirname($path));
- } else
- {
- if (dirname($path) != $masterPath)
- {
- $mp = explode(PATH_DELIMITER, $masterPath);
- $np = explode(PATH_DELIMITER, str_replace('\\', '/', dirname($path)));
- if (count($np) < count($mp))
- {
- $masterPath = join($np, PATH_DELIMITER);
- } else
- {
- $test = false;
- $found = false;
- for($i=0;$i < count($mp) && $i < count($np);$i++)
- {
- if (PHPDOCUMENTOR_WINDOWS)
- {
- if (strtolower($mp[$i]) != strtolower($np[$i])) $found = $i;
- } else
- {
- if ($mp[$i] != $np[$i]) $found = $i;
- }
- }
- if ($found !== false)
- {
- $mp = array_slice($mp,0,$found);
- $masterPath = join($mp,PATH_DELIMITER);
- }
- }
- }
- }
- }
- return $masterPath;
- }
-
- /**
- * Retrieve tutorial subdirectories and their contents from the list of
- * files to parse
- * @param array array of paths (strings)
- * @return array array(filelist - tutorials, tutorials)
- */
- function getTutorials($filelist)
- {
- $list = $tutorials = array();
- foreach($filelist as $file)
- {
- if (strpos($file,'tutorials/') !== false)
- {
- $tutedir = explode('/',substr($file,strpos($file,'tutorials/')));
- array_shift($tutedir);
- if (count($tutedir) <= 3)
- {
- $res = array();
- // kludge - will need to fix for 2.0
- $res['category'] = $GLOBALS['phpDocumentor_DefaultCategoryName'];
- $res['package'] = array_shift($tutedir);
- $res['subpackage'] = '';
- if (count($tutedir) > 1)
- $res['subpackage'] = array_shift($tutedir);
- $f = array_shift($tutedir);
- $res['tutename'] = $f;
- $f = explode('.',$f);
- $res['tutetype'] = array_pop($f);
- if ($res['tutetype'] == 'ini') continue;
- $res['path'] = $file;
- if (@file_exists($file . '.ini'))
- {
- $res['ini'] = phpDocumentor_parse_ini_file($file . '.ini', true);
- } else
- {
- $res['ini'] = false;
- }
- $tutorials[] = $res;
- }
- } else $list[] = $file;
- }
- return array($list,$tutorials);
- }
-
- /**
- * @param string base directory from {@link getBase()}
- * @param array file list from {@link dirList()}
- * @return array array(filelist - README/INSTALL/CHANGELOG,
- * README/INSTALL/CHANGELOG)
- */
- function getReadmeInstallChangelog($base,$filelist)
- {
- $list = $ric = array();
- $names = $GLOBALS['_phpDocumentor_RIC_files'];
- foreach($filelist as $file)
- {
- if ((dirname($file) == $base) && in_array(strtoupper(basename($file)), $names))
- { // be sure to change $this->checkIgnore() if any other files are added here!!
- $ric[] = $file;
- } else
- {
- $list[] = $file;
- }
- }
- return array($list,$ric);
- }
-
- /**
- * @param string directory
- * @param string base directory
- * @param array array of ignored items
- * @param boolean the "hidden" flag
- * @param boolean the "ignoresymlinks" flag
- * @uses dirList
- * @uses checkIgnore
- * @uses setup_dirs
- */
- function getDirTree($dir, $base_dir, $ignore = array(), $hidden = false, $ignoresymlinks = false)
- {
- $allfiles = $this->dirList($dir,$hidden,$ignoresymlinks);
- $struc = array();
- foreach($allfiles as $file)
- {
- if ($this->checkIgnore(basename($file),dirname(realpath($file)),$ignore,$ignoresymlinks)) continue;
- if (PHPDOCUMENTOR_WINDOWS) {
- $path = substr(dirname($file),strlen(str_replace('\\','/',realpath($base_dir))));
- } else {
- $path = substr(dirname($file),strlen(str_replace('\\','/',realpath($base_dir)))+1);
- }
- if (!$path) $path = '/';
- $parts = pathinfo($file);
- if (!isset($parts['extension']))
- {
- $parts['extension'] = '';
- }
- $struc[$path][] = array(
- 'file' => $parts['basename'],
- 'ext' => $parts['extension'],
- 'path' => $file);
- }
- uksort($struc,'strnatcasecmp');
- foreach($struc as $key => $ind)
- {
- usort($ind,'Ioinc_sortfiles');
- $struc[$key] = $ind;
- $save = $key;
- if ($key != '/')
- {
- $key = explode('/',$key);
- while (count($key))
- {
- array_pop($key);
- if (isset($struc[join('/',$key)]))
- {
- $struc[join('/',$key)][substr($save,strlen(join('/',$key)) + 1)] = $ind;
- unset($struc[$save]);
- }
- }
- }
- }
- foreach($struc as $key => $ind)
- {
- if ($key != '/')
- {
- if (count(explode('/',$key)) == 1)
- {
- $struc['/'][$key] = $struc[$key];
- unset($struc[$key]);
- }
- }
- }
- $tempstruc = $struc;
- unset($tempstruc['/']);
- $leftover_dirs = array_keys($tempstruc);
- $splitdirs = array();
- foreach($leftover_dirs as $dir)
- {
- $splitdirs[] = explode('/',$dir);
- }
- $leftover_dirs = array();
-
- foreach($splitdirs as $dir)
- {
- $save = join($dir,'/');
- $struc['/'] = setup_dirs($struc['/'], $dir, $tempstruc[$save]);
- unset($struc[$save]);
- }
- @uksort($struc['/'],'Ioinc_mystrucsort');
- return $struc;
- }
-
- /**
- * Reads a file and returns it as a string
- * Does basic error checking
- *
- * file extensions are set in {@link phpdoc.inc}
- *
- * @global array PHP File extensions, used to validate that $path is a PHP File
- * @global array PHP File extensions in a CVS repository, used to validate that $path is a PHP File
- * @param string $path
- */
- function readPhpFile($path, $quietMode = false)
- {
- global $_phpDocumentor_cvsphpfile_exts, $_phpDocumentor_phpfile_exts;
- // tiberiusblue addition
- $cvsExt = $_phpDocumentor_cvsphpfile_exts;
- $ext = $_phpDocumentor_phpfile_exts;
- if (file_exists($path))
- {
- if (is_file($path))
- {
- // check extension
- $tmp = explode(".",$path);
- // tiberiusblue addition
- $tmp2 = $tmp;
- if (in_array(array_pop($tmp),$ext))
- {
- phpDocumentor_out(" -- Parsing file\n");
- flush();
- if (function_exists('file_get_contents')) {
- return file_get_contents($path);
- }
- $fp = fopen($path,"r");
- $ret = fread($fp,filesize($path));
- fclose($fp);
- return $ret;
- } elseif (in_array(array_pop($tmp2),$cvsExt))
- {
- phpDocumentor_out(" CVS file [EXPERIMENTAL]\n");
- flush();
- if (function_exists('file_get_contents')) {
- $ret = file_get_contents($path);
- } else {
- $fp = fopen($path,"r");
- $ret = fread($fp,filesize($path));
- fclose($fp);
- }
- $ret = strstr($ret,"<?");
- $ret = substr($ret,0,strpos($ret,"@\n"));
- $ret = str_replace("@@","@",$ret);
- return $ret;
- } else
- {
- phpDocumentor_out(" -- File not parsed, not a php file\n");
- flush();
- }
- } else {
- phpDocumentor_out(" -- Unable to read file, not a file\n");
- flush();
- }
- } else {
- phpDocumentor_out(" -- Unable to read file, file does not exist\n");
- flush();
- }
- }
-
- /**
- * Tell whether to ignore a file or a directory
- * allows * and ? wildcards
- *
- * @author Greg Beaver <cellog@php.net>
- * @param string $file just the file name of the file or directory,
- * in the case of directories this is the last dir
- * @param string $path the path to consider (should be checked by
- * realpath() before, and may be relative)
- * @param array $ignore
- * @param bool
- * @param bool Ignore symlinks?
- * @return bool true if $path should be ignored, false if it should not
- */
- function checkIgnore($file,$path,$ignore,$ignore_no_ext = true,$ignoresymlinks = false)
- {
- global $_phpDocumentor_RIC_files;
-
- if ($ignoresymlinks && is_link($path . PATH_DELIMITER . $file)) return false;
-
- if (!count($ignore)) return false;
-
- if (!isset($this->ignore))
- {
- $this->_setupIgnore($ignore);
- }
- if (!$this->ignore)
- {
- return false;
- }
-
- if ($ignore_no_ext &&
- !in_array(strtoupper($file), $_phpDocumentor_RIC_files))
- {
- if (!is_numeric(strpos($file,'.'))) return true;
- }
- if (is_array($this->ignore))
- {
- foreach($this->ignore as $match)
- {
- // match is an array if the ignore parameter was a /path/to/pattern
- if (is_array($match))
- {
- // check to see if the path matches with a path delimiter appended
- preg_match('/^' . strtoupper($match[0]).'$/', strtoupper($path) . PATH_DELIMITER,$find);
- if (!count($find))
- {
- // check to see if it matches without an appended path delimiter
- preg_match('/^' . strtoupper($match[0]).'$/', strtoupper($path), $find);
- }
- if (count($find))
- {
- // check to see if the file matches the file portion of the regex string
- preg_match('/^' . strtoupper($match[1]).'$/', strtoupper($file), $find);
- if (count($find))
- {
- return true;
- }
- }
- // check to see if the full path matches the regex
- preg_match('/^' . strtoupper($match[0]).'$/',
- strtoupper($path . DIRECTORY_SEPARATOR . $file), $find);
- if (count($find))
- {
- return true;
- }
- } else
- {
- // ignore parameter was just a pattern with no path delimiters
- // check it against the path
- preg_match('/^' . strtoupper($match).'$/', strtoupper($path), $find);
- if (count($find))
- {
- return true;
- }
- // check it against the file only
- preg_match('/^' . strtoupper($match).'$/', strtoupper($file), $find);
- if (count($find))
- {
- return true;
- }
- }
- }
- }
- return false;
- }
-
- /**
- * Construct the {@link $ignore} array
- * @author Greg Beaver <cellog@php.net>
- * @param array strings of files/paths/wildcards to ignore
- * @access protected
- */
- function _setupIgnore($ignore)
- {
- $ig = array();
- if ( ! is_array($ignore))
- {
- $this->ignore = false;
- return;
- }
- for($i=0; $i<count($ignore);$i++)
- {
- if (empty($ignore[$i]))
- continue;
-
- $ignore[$i] = strtr($ignore[$i], '\\', '/');
- $ignore[$i] = str_replace('//','/',$ignore[$i]);
-
- if (!is_numeric(strpos($ignore[$i],PATH_DELIMITER)))
- {
- $ig[] = $this->getRegExpableSearchString($ignore[$i]);
- } else
- {
- if (basename($ignore[$i]) . PATH_DELIMITER == $ignore[$i])
- $ig[] = $this->getRegExpableSearchString($ignore[$i]);
- else
- $ig[] = array($this->getRegExpableSearchString($ignore[$i]),$this->getRegExpableSearchString(basename($ignore[$i])));
- }
- }
- if (count($ig)) $this->ignore = $ig;
- }
-
- /**
- * Converts $s into a string that can be used with preg_match
- * @param string $s string with wildcards ? and *
- * @author Greg Beaver <cellog@php.net>
- * @return string converts * to .*, ? to ., etc.
- */
- function getRegExpableSearchString($s)
- {
- $y = '\/';
- if (DIRECTORY_SEPARATOR == '\\')
- {
- $y = '\\\\';
- }
- $s = str_replace('/', DIRECTORY_SEPARATOR, $s);
- $x = strtr($s, array('?' => '.','*' => '.*','.' => '\\.','\\' => '\\\\','/' => '\\/',
- '[' => '\\[',']' => '\\]','-' => '\\-'));
- if (strpos($s, DIRECTORY_SEPARATOR) !== false &&
- strrpos($s, DIRECTORY_SEPARATOR) === strlen($s) - 1)
- {
- $x = "(?:.*$y$x?.*|$x.*)";
- }
- return $x;
- }
-
- /**
- * Removes files from the $dir array that do not match the search string in
- * $match
- * @param array $dir array of filenames (full path)
- * @param string $match search string with wildcards
- * @author Greg Beaver <cellog@php.net>
- * @return string|array listing of every file in a directory that matches
- * the search string
- */
- function removeNonMatches($dir, $match)
- {
- $match = $this->getRegExpableSearchString($match);
- $nodir = false;
- if (!is_array($dir))
- {
- $dir = array($dir);
- $nodir = true;
- }
- foreach($dir as $i => $file)
- {
- preg_match('/^'.$match.'$/',basename($file),$find);
- if (!count($find)) unset($dir[$i]);
- }
- if ($nodir) return $dir[0];
- return $dir;
- }
-
- /**
- * Take a filename with wildcards and return all files that match the
- * wildcards
- * @param string $file a full path from the -f command-line parameter, with
- * potential * and ? wildcards.
- * @return mixed if $file contains wildcards, returns an array of matching
- * files, otherwise returns false
- * @author Greg Beaver <cellog@php.net>
- * @uses dirList
- * @uses removeNonMatches
- */
- function getAllFiles($file)
- {
- $path = realpath(dirname($file));
- $file = basename($file);
- // any wildcards?
- if (is_numeric(strpos($file,'?')) || is_numeric(strpos($file,'*')))
- {
- $files = $this->dirList($path);
- $a = $this->removeNonMatches($files,$file);
- return $a;
- }
- return false;
- }
-}
-
-/**#@+
- * Sorting functions for the file list
- * @param string
- * @param string
- */
-function Ioinc_sortfiles($a, $b)
-{
- return strnatcasecmp($a['file'],$b['file']);
-}
-
-function Ioinc_mystrucsort($a, $b)
-{
- if (is_numeric($a) && is_string($b)) return 1;
- if (is_numeric($b) && is_string($a)) return -1;
- if (is_numeric($a) && is_numeric($b))
- {
- if ($a > $b) return 1;
- if ($a < $b) return -1;
- if ($a == $b) return 0;
- }
- return strnatcasecmp($a,$b);
-}
-/**#@-*/
-
-/**
- * Recursively add all the subdirectories of $contents to $dir without erasing anything in
- * $dir
- * @param array
- * @param array
- * @return array processed $dir
- */
-function set_dir($dir,$contents)
-{
- while(list($one,$two) = each($contents))
- {
- if (isset($dir[$one]))
- {
- $dir[$one] = set_dir($dir[$one],$contents[$one]);
- } else $dir[$one] = $two;
- }
- return $dir;
-}
-
-/**
- * Recursively move contents of $struc into associative array
- *
- * The contents of $struc have many indexes like 'dir/subdir/subdir2'.
- * This function converts them to
- * array('dir' => array('subdir' => array('subdir2')))
- * @param array struc is array('dir' => array of files in dir,'dir/subdir' => array of files in dir/subdir,...)
- * @param array array form of 'dir/subdir/subdir2' array('dir','subdir','subdir2')
- * @return array same as struc but with array('dir' => array(file1,file2,'subdir' => array(file1,...)))
- */
-function setup_dirs($struc,$dir,$contents)
-{
- if (!count($dir))
- {
- foreach($contents as $dir => $files)
- {
- if (is_string($dir))
- {
- if (strpos($dir,'/'))
- {
- $test = true;
- $a = $contents[$dir];
- unset($contents[$dir]);
- $b = explode('/',$dir);
- $c = array_shift($b);
- if (isset($contents[$c]))
- {
- $contents[$c] = set_dir($contents[$c],setup_dirs(array(),$b,$a));
- } else $contents[$c] = setup_dirs(array(),$b,$a);
- }
- }
- }
- return $contents;
- }
- $me = array_shift($dir);
- if (!isset($struc[$me])) $struc[$me] = array();
- $struc[$me] = setup_dirs($struc[$me],$dir,$contents);
- return $struc;
-}
-
-if (!function_exists('get_include_path')) {
-function get_include_path()
-{
- return ini_get('include_path');
-}
-}
-?>